List of Publications
  1. Performance Assessment of Variant Calling Pipelines using Human Whole Exome Sequencing and Simulated data, Manojkumar Kumaran, Umadevi Subramanian, Bharanidharan Devarajan* (2019), BMC Bioinformatics, 20:342, 2019.

  2. Smartphone-Based Application Improves the Detection of Retinoblastoma. Amit Khedekar, Bharanidharan Devarajan*, Kim Ramasamy, Veerappan Muthukkaruppan, Usha Kim. Eye (Lond). 2019 Jan 11.

  3. Mechanisms of Fluoroquinolone and Aminoglycoside Resistance in Keratitis-Associated Pseudomonas aeruginosa, K Thirumalmuthu, B Devarajan, L Prajna, V Mohankumar, Microbial Drug Resistance, 26 Feb, 2019

  4. Hemadevi, B. Vidyarani, M. Lalitha, P. Bharanidharan, D*. (2015) Human Corneal MicroRNA Expression Profile in Fungal Keratitis, Invest Ophthalmol Vis Sci.56:7939– 7946. (IF:3.5)

  5. Kannan T, Aloysius A, Bharanidharan D, Namrata G, Usha K, Veerappan M and Ayyasamy V. (2015) A stepwise strategy for rapid and cost-effective RB1screening in Indian retinoblastoma patients, J Hum Genet. 60:547-52. (IF:2.5)

  6. Bharanidharan D*, Logambiga P, Thirumalai Raj K, Aloysius A A, Usha K, Veerappan M and Ayyasamy V*. (2015) Targeted next generation sequencing of RB1gene for the molecular diagnosis of Retinoblastoma. BMC Cancer. 15:320. (IF:3.4)

  7. Nithya, V. Logambiga P. Sivakumar, N. Lalitha, P. Vidyarani, M* and Bharanidharan, D*. (2014) Draft genome sequences of Staphylococcus aureus AMRF1 (ST22) and AMRF2 (ST672): Ocular methicillin resistant isolates. Genome Announc. 2(2):e00168-14.

  8. Lakshmi Priya, J. Logambiga P. Sivakumar, N. Lalitha, P. Bharanidharan, D* and Vidyarani, M* (2014) Draft Genome Sequence of an Invasive Multi Drug Resistant Strain Pseudomonas aeruginosa BK1, Isolated from a Keratitis Patient. Genomennounc. 2(2):e00153-14

  9. Bharanidharan D*, Mishra A*, Reardon ME, Dwivedi P, Krishnan V, Cisar JO, Das A, Narayana SV, Ton-That H. (2011) Two autonomous structural modules in the fimbrial shaft adhesin FimA mediate actinomyces interactions with streptococci and host cells during oral biofilm development. Mol Microbiol. 81, 1205–1220. (IF: 4.82)

  10. Bharanidharan, D., Thiyagarajan, S. and Gautham, N. (2007) Ruthenium hexammine ion interactions with Z-DNA. Acta Cryst. F63, 1008-1013.(IF: 0.65)

  11. Bharanidharan, D. and Gautham, N. (2006) Principal component analysis (PCA) of DNA oligomers structural data. Biochem. Biophys. Res. Commun. 340, 1229–1237.(IF:3.06)

  12. Bharanidharan, D. and Gautham, N. (2005) Amino acid variation in cellular processes in 108 bacterial proteomes. Arch. Microbiol. 184, 168–174.(IF:2.14)

  13. Bharanidharan, D. Ramya Bhargavi, G. Kavitha, U. and Gautham, N. (2004) Correlations between nucleotide frequencies and amino acid composition in 115 bacterial species. Biochem. Biophys. Res. Commun. 315, 1097–1103.(IF:2.98) *(authors are equally contributed)

  14. Dreaden, T.M., D, Bharanidharan, Barry, B.A., and Schmidt-Krey, I. (2012). Structure-function insights on membrane and soluble proteins revealed by electron crystallography. Schmidt-Krey,Ingeborg; Cheng, Yifan (Eds.), Methods in Molecular Biology. 955, Humana Press 519-26. (IF:1.29) 

Department of Bioinformatics
​Aravind Medical Research Foundation
No 1, Anna Nagar, Madurai, Tamil Nadu - 625020, India
email :;
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